Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
ATF1P18846 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 AC068880.1-201ENST00000507289 2297 ntBASIC16.81■□□□□ 0.28
ATF1P18846 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.81■□□□□ 0.28
ATF1P18846 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.81■□□□□ 0.28
ATF1P18846 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.81■□□□□ 0.28
ATF1P18846 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.81■□□□□ 0.28
ATF1P18846 AL137784.2-201ENST00000607332 1000 ntBASIC16.81■□□□□ 0.28
ATF1P18846 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATF1P18846 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATF1P18846 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.8■□□□□ 0.28
ATF1P18846 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.8■□□□□ 0.28
ATF1P18846 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 AC073210.2-201ENST00000430369 194 ntBASIC16.8■□□□□ 0.28
ATF1P18846 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 AC005829.2-201ENST00000571422 1056 ntBASIC16.8■□□□□ 0.28
ATF1P18846 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.8■□□□□ 0.28
ATF1P18846 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATF1P18846 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 AP000997.3-201ENST00000623333 2250 ntBASIC16.8■□□□□ 0.28
ATF1P18846 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATF1P18846 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
ATF1P18846 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
ATF1P18846 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.79■□□□□ 0.28
ATF1P18846 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATF1P18846 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.79■□□□□ 0.28
ATF1P18846 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.79■□□□□ 0.28
ATF1P18846 MIPEPP3-201ENST00000412105 444 ntBASIC16.79■□□□□ 0.28
ATF1P18846 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.79■□□□□ 0.28
ATF1P18846 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.79■□□□□ 0.28
ATF1P18846 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.79■□□□□ 0.28
ATF1P18846 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms