Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCC1P18754 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RCC1P18754 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCC1P18754 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.17■□□□□ 0.18
RCC1P18754 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 AL161938.1-201ENST00000569833 2180 ntBASIC16.17■□□□□ 0.18
RCC1P18754 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RCC1P18754 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.17■□□□□ 0.18
RCC1P18754 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.17■□□□□ 0.18
RCC1P18754 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.17■□□□□ 0.18
RCC1P18754 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.17■□□□□ 0.18
RCC1P18754 PNMA6B-201ENST00000538162 1200 ntBASIC16.17■□□□□ 0.18
RCC1P18754 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.17■□□□□ 0.18
RCC1P18754 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RCC1P18754 AP006587.1-201ENST00000534129 1502 ntBASIC16.17■□□□□ 0.18
RCC1P18754 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RCC1P18754 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 AL133373.2-201ENST00000623187 2828 ntBASIC16.17■□□□□ 0.18
RCC1P18754 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RCC1P18754 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCC1P18754 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.17■□□□□ 0.18
RCC1P18754 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RCC1P18754 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 AP000997.3-201ENST00000623333 2250 ntBASIC16.16■□□□□ 0.18
RCC1P18754 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.16■□□□□ 0.18
RCC1P18754 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RCC1P18754 AC060766.5-201ENST00000590539 871 ntBASIC16.16■□□□□ 0.18
RCC1P18754 AC083880.1-201ENST00000608266 535 ntBASIC16.16■□□□□ 0.18
RCC1P18754 AL121906.2-201ENST00000621597 723 ntBASIC16.16■□□□□ 0.18
RCC1P18754 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.16■□□□□ 0.18
RCC1P18754 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCC1P18754 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCC1P18754 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RCC1P18754 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RCC1P18754 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RCC1P18754 AC141586.3-201ENST00000562166 1838 ntBASIC16.15■□□□□ 0.18
RCC1P18754 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.15■□□□□ 0.18
RCC1P18754 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.15■□□□□ 0.18
RCC1P18754 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.15■□□□□ 0.18
RCC1P18754 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.15■□□□□ 0.18
RCC1P18754 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.15■□□□□ 0.18
RCC1P18754 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 AC009113.1-201ENST00000570267 2443 ntBASIC16.15■□□□□ 0.18
RCC1P18754 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.15■□□□□ 0.18
RCC1P18754 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
RCC1P18754 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCC1P18754 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
RCC1P18754 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms