Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.28■■□□□ 1.64
COL5A2P05997 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC25.28■■□□□ 1.64
COL5A2P05997 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.27■■□□□ 1.64
COL5A2P05997 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
COL5A2P05997 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL5A2P05997 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 TSPY22P-201ENST00000427496 604 ntBASIC25.27■■□□□ 1.64
COL5A2P05997 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
COL5A2P05997 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
COL5A2P05997 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL5A2P05997 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.64
COL5A2P05997 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 AL391807.1-203ENST00000604392 2365 ntBASIC25.26■■□□□ 1.63
COL5A2P05997 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.26■■□□□ 1.63
COL5A2P05997 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC25.26■■□□□ 1.63
COL5A2P05997 LINC00265-3P-201ENST00000447588 903 ntBASIC25.26■■□□□ 1.63
COL5A2P05997 CALM1-205ENST00000553542 877 ntTSL 5 BASIC25.26■■□□□ 1.63
COL5A2P05997 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.26■■□□□ 1.63
COL5A2P05997 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL5A2P05997 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.26■■□□□ 1.63
COL5A2P05997 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.25■■□□□ 1.63
COL5A2P05997 ZNF815P-204ENST00000434898 1737 ntBASIC25.25■■□□□ 1.63
COL5A2P05997 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.25■■□□□ 1.63
COL5A2P05997 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.25■■□□□ 1.63
COL5A2P05997 AP002469.2-201ENST00000531724 424 ntBASIC25.25■■□□□ 1.63
COL5A2P05997 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 MIR3917-201ENST00000580971 93 ntBASIC25.25■■□□□ 1.63
COL5A2P05997 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.25■■□□□ 1.63
COL5A2P05997 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.25■■□□□ 1.63
COL5A2P05997 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC25.25■■□□□ 1.63
COL5A2P05997 GPALPP1-207ENST00000611650 899 ntBASIC25.25■■□□□ 1.63
COL5A2P05997 GXYLT1P4-201ENST00000613576 1192 ntBASIC25.25■■□□□ 1.63
COL5A2P05997 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.25■■□□□ 1.63
COL5A2P05997 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC25.25■■□□□ 1.63
COL5A2P05997 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
COL5A2P05997 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL5A2P05997 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 AL512408.1-201ENST00000569378 2000 ntBASIC25.24■■□□□ 1.63
COL5A2P05997 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.24■■□□□ 1.63
COL5A2P05997 TSPY12P-201ENST00000421279 868 ntBASIC25.24■■□□□ 1.63
COL5A2P05997 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 TOB2P1-201ENST00000469761 992 ntBASIC25.24■■□□□ 1.63
COL5A2P05997 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.24■■□□□ 1.63
COL5A2P05997 BMF-207ENST00000559701 630 ntTSL 3 BASIC25.24■■□□□ 1.63
COL5A2P05997 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 AL671883.3-201ENST00000603274 991 ntBASIC25.24■■□□□ 1.63
COL5A2P05997 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC25.24■■□□□ 1.63
COL5A2P05997 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC25.24■■□□□ 1.63
COL5A2P05997 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.24■■□□□ 1.63
COL5A2P05997 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.24■■□□□ 1.63
COL5A2P05997 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL5A2P05997 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.23■■□□□ 1.63
COL5A2P05997 AC073314.1-201ENST00000568729 2216 ntBASIC25.23■■□□□ 1.63
COL5A2P05997 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC25.23■■□□□ 1.63
COL5A2P05997 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 MCCD1P1-208ENST00000445732 328 ntBASIC25.23■■□□□ 1.63
COL5A2P05997 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.23■■□□□ 1.63
COL5A2P05997 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.23■■□□□ 1.63
COL5A2P05997 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL5A2P05997 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.23■■□□□ 1.63
COL5A2P05997 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.22■■□□□ 1.63
COL5A2P05997 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL5A2P05997 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL5A2P05997 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms