Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCGO76070 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCGO76070 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC12.91□□□□□ -0.34
SNCGO76070 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCGO76070 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SNCGO76070 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCGO76070 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCGO76070 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCGO76070 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 AP006587.3-201ENST00000525742 1516 ntBASIC12.91□□□□□ -0.34
SNCGO76070 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.91□□□□□ -0.34
SNCGO76070 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCGO76070 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCGO76070 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SNCGO76070 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
SNCGO76070 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC12.9□□□□□ -0.34
SNCGO76070 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SNCGO76070 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC12.9□□□□□ -0.34
SNCGO76070 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCGO76070 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCGO76070 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCGO76070 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCGO76070 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.35
SNCGO76070 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SNCGO76070 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
SNCGO76070 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SNCGO76070 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SNCGO76070 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SNCGO76070 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 AC009113.1-201ENST00000570267 2443 ntBASIC12.89□□□□□ -0.35
SNCGO76070 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.89□□□□□ -0.35
SNCGO76070 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCGO76070 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SNCGO76070 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SNCGO76070 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SNCGO76070 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SNCGO76070 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
SNCGO76070 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.89□□□□□ -0.35
SNCGO76070 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.89□□□□□ -0.35
SNCGO76070 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNCGO76070 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNCGO76070 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms