Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
RFPL2O75678 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL2O75678 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFPL2O75678 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFPL2O75678 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.04■□□□□ 0.8
RFPL2O75678 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
RFPL2O75678 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RFPL2O75678 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.04■□□□□ 0.8
RFPL2O75678 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 CR769767.2-201ENST00000622735 460 ntBASIC20.04■□□□□ 0.8
RFPL2O75678 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.04■□□□□ 0.8
RFPL2O75678 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
RFPL2O75678 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFPL2O75678 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL2O75678 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFPL2O75678 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RFPL2O75678 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFPL2O75678 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFPL2O75678 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL2O75678 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 SPDYE13P-201ENST00000445314 798 ntBASIC20.03■□□□□ 0.8
RFPL2O75678 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.03■□□□□ 0.8
RFPL2O75678 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.03■□□□□ 0.8
RFPL2O75678 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.03■□□□□ 0.8
RFPL2O75678 AC012313.10-201ENST00000623509 926 ntBASIC20.03■□□□□ 0.8
RFPL2O75678 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL2O75678 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL2O75678 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL2O75678 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFPL2O75678 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RFPL2O75678 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.02■□□□□ 0.8
RFPL2O75678 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
RFPL2O75678 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RFPL2O75678 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.02■□□□□ 0.8
RFPL2O75678 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RFPL2O75678 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.02■□□□□ 0.8
RFPL2O75678 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.02■□□□□ 0.8
RFPL2O75678 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL2O75678 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.02■□□□□ 0.8
RFPL2O75678 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.02■□□□□ 0.8
RFPL2O75678 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 AC099778.1-201ENST00000568593 1911 ntBASIC20.02■□□□□ 0.79
RFPL2O75678 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
RFPL2O75678 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL2O75678 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFPL2O75678 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
RFPL2O75678 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
RFPL2O75678 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.01■□□□□ 0.79
RFPL2O75678 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.01■□□□□ 0.79
RFPL2O75678 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.01■□□□□ 0.79
RFPL2O75678 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.01■□□□□ 0.79
RFPL2O75678 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.01■□□□□ 0.79
RFPL2O75678 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFPL2O75678 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.01■□□□□ 0.79
RFPL2O75678 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL2O75678 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms