Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TRIM13O60858 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM13O60858 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.86■□□□□ 0.61
TRIM13O60858 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM13O60858 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 AL121906.2-201ENST00000621597 723 ntBASIC18.86■□□□□ 0.61
TRIM13O60858 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM13O60858 AC073111.5-205ENST00000641717 521 ntBASIC18.86■□□□□ 0.61
TRIM13O60858 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 AC026471.1-201ENST00000564629 3026 ntBASIC18.86■□□□□ 0.61
TRIM13O60858 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 MIR5787-201ENST00000611784 55 ntBASIC18.85■□□□□ 0.61
TRIM13O60858 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM13O60858 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TRIM13O60858 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM13O60858 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
TRIM13O60858 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM13O60858 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 MIPEPP3-201ENST00000412105 444 ntBASIC18.84■□□□□ 0.61
TRIM13O60858 DUSP5P2-201ENST00000426873 1033 ntBASIC18.84■□□□□ 0.61
TRIM13O60858 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM13O60858 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM13O60858 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TRIM13O60858 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM13O60858 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM13O60858 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM13O60858 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM13O60858 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM13O60858 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM13O60858 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
TRIM13O60858 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM13O60858 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM13O60858 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM13O60858 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM13O60858 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM13O60858 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 CDCA4P2-201ENST00000441182 718 ntBASIC18.83■□□□□ 0.6
TRIM13O60858 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM13O60858 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM13O60858 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM13O60858 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM13O60858 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM13O60858 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM13O60858 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms