Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PHF1O43189 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 RARRES2P10-201ENST00000564312 460 ntBASIC16.54■□□□□ 0.24
PHF1O43189 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.54■□□□□ 0.24
PHF1O43189 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PHF1O43189 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.54■□□□□ 0.24
PHF1O43189 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHF1O43189 TREX1-205ENST00000625293 1783 ntBASIC16.54■□□□□ 0.24
PHF1O43189 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 MMP23A-201ENST00000234610 1017 ntBASIC16.53■□□□□ 0.24
PHF1O43189 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.53■□□□□ 0.24
PHF1O43189 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PHF1O43189 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.53■□□□□ 0.24
PHF1O43189 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.53■□□□□ 0.24
PHF1O43189 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.53■□□□□ 0.24
PHF1O43189 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHF1O43189 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHF1O43189 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PHF1O43189 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PHF1O43189 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.52■□□□□ 0.24
PHF1O43189 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.52■□□□□ 0.24
PHF1O43189 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.52■□□□□ 0.24
PHF1O43189 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PHF1O43189 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PHF1O43189 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 AC026471.5-201ENST00000615068 467 ntBASIC16.52■□□□□ 0.24
PHF1O43189 AC005363.2-201ENST00000618631 242 ntBASIC16.52■□□□□ 0.24
PHF1O43189 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.52■□□□□ 0.24
PHF1O43189 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHF1O43189 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PHF1O43189 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHF1O43189 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHF1O43189 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.52■□□□□ 0.23
PHF1O43189 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHF1O43189 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.52■□□□□ 0.23
PHF1O43189 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
PHF1O43189 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.52■□□□□ 0.23
PHF1O43189 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PHF1O43189 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.52■□□□□ 0.23
PHF1O43189 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PHF1O43189 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.51■□□□□ 0.23
PHF1O43189 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.51■□□□□ 0.23
PHF1O43189 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.51■□□□□ 0.23
PHF1O43189 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.51■□□□□ 0.23
PHF1O43189 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.51■□□□□ 0.23
PHF1O43189 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PHF1O43189 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PHF1O43189 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.51■□□□□ 0.23
PHF1O43189 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.51■□□□□ 0.23
PHF1O43189 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.51■□□□□ 0.23
PHF1O43189 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.51■□□□□ 0.23
PHF1O43189 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.51■□□□□ 0.23
PHF1O43189 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHF1O43189 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.51■□□□□ 0.23
PHF1O43189 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms