Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
UPK2O00526 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
UPK2O00526 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK2O00526 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.37■□□□□ 0.05
UPK2O00526 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK2O00526 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 POM121L13P-201ENST00000422362 380 ntBASIC15.37■□□□□ 0.05
UPK2O00526 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 AC104771.1-201ENST00000603335 964 ntBASIC15.37■□□□□ 0.05
UPK2O00526 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK2O00526 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.37■□□□□ 0.05
UPK2O00526 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UPK2O00526 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
UPK2O00526 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.37■□□□□ 0.05
UPK2O00526 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK2O00526 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UPK2O00526 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK2O00526 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
UPK2O00526 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK2O00526 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.36■□□□□ 0.05
UPK2O00526 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK2O00526 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 AL031598.1-201ENST00000561511 1773 ntBASIC15.36■□□□□ 0.05
UPK2O00526 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK2O00526 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
UPK2O00526 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK2O00526 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK2O00526 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
UPK2O00526 Z98044.1-201ENST00000632503 1764 ntBASIC15.35■□□□□ 0.05
UPK2O00526 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK2O00526 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK2O00526 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.35■□□□□ 0.05
UPK2O00526 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK2O00526 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK2O00526 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK2O00526 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 AC092666.2-201ENST00000613287 246 ntBASIC15.35■□□□□ 0.05
UPK2O00526 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK2O00526 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK2O00526 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
UPK2O00526 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK2O00526 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms