Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLIC1O00299 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC1O00299 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 AL512353.2-201ENST00000448759 1962 ntBASIC18.06■□□□□ 0.48
CLIC1O00299 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.06■□□□□ 0.48
CLIC1O00299 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CLIC1O00299 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLIC1O00299 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC1O00299 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CLIC1O00299 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.06■□□□□ 0.48
CLIC1O00299 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.06■□□□□ 0.48
CLIC1O00299 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLIC1O00299 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC1O00299 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC1O00299 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLIC1O00299 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC1O00299 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLIC1O00299 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC1O00299 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLIC1O00299 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.05■□□□□ 0.48
CLIC1O00299 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC1O00299 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC1O00299 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC1O00299 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CLIC1O00299 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC1O00299 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC1O00299 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC1O00299 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC1O00299 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC1O00299 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC1O00299 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLIC1O00299 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC1O00299 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC1O00299 AC007613.1-201ENST00000572811 2597 ntBASIC18.04■□□□□ 0.48
CLIC1O00299 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC1O00299 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC1O00299 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLIC1O00299 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CLIC1O00299 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC1O00299 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC1O00299 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLIC1O00299 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLIC1O00299 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC1O00299 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC1O00299 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC1O00299 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC1O00299 AC090164.3-201ENST00000610780 2143 ntBASIC18.04■□□□□ 0.48
CLIC1O00299 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC1O00299 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLIC1O00299 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC1O00299 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLIC1O00299 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms