Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 AL121829.2-201ENST00000620908 328 ntBASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 AC104771.1-201ENST00000603335 964 ntBASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPSF4LA6NMK7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF4LA6NMK7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.65■□□□□ 0.42
CPSF4LA6NMK7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPSF4LA6NMK7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms