Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 CROCCP1-201ENST00000426910 5675 ntBASIC13.62□□□□□ -0.23
LINC01549A6NIU2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01549A6NIU2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 CYP21A1P-202ENST00000354927 1481 ntBASIC13.61□□□□□ -0.23
LINC01549A6NIU2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 AL136162.1-201ENST00000607711 1078 ntBASIC13.61□□□□□ -0.23
LINC01549A6NIU2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 ZNF815P-204ENST00000434898 1737 ntBASIC13.61□□□□□ -0.23
LINC01549A6NIU2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01549A6NIU2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 IRS3P-201ENST00000223076 1006 ntBASIC13.6□□□□□ -0.23
LINC01549A6NIU2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 AC023632.3-201ENST00000521633 145 ntBASIC13.6□□□□□ -0.23
LINC01549A6NIU2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 AC024257.2-201ENST00000549699 147 ntBASIC13.6□□□□□ -0.23
LINC01549A6NIU2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01549A6NIU2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms