Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms