Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV9-1A0A075B6T8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV9-1A0A075B6T8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 AL358852.1-201ENST00000623174 1268 ntBASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV9-1A0A075B6T8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 AC097381.1-201ENST00000429019 1296 ntBASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNF815P-204ENST00000434898 1737 ntBASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV9-1A0A075B6T8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 SERBP1P1-201ENST00000396021 1160 ntBASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV9-1A0A075B6T8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms