Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB4Q9UN71 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 AL390961.4-201ENST00000623958 2535 ntBASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB4Q9UN71 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 LINC01465-201ENST00000408887 1940 ntBASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB4Q9UN71 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 AC018553.1-201ENST00000616682 1458 ntBASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB4Q9UN71 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 CDCA4P2-201ENST00000441182 718 ntBASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB4Q9UN71 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms