Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 UNC93B4-201ENST00000505679 747 ntBASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.38■□□□□ 0.53
PNPLA3Q9NST1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PNPLA3Q9NST1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 SOX15-203ENST00000570788 1093 ntBASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 AIRN-201ENST00000601203 4374 ntBASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PNPLA3Q9NST1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC087633.2-202ENST00000565166 1439 ntBASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PNPLA3Q9NST1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms