Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 HTR7P1-201ENST00000538670 1336 ntBASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN3Q9NQS3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 TUBB8P6-201ENST00000436895 1288 ntBASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 RARRES2P10-201ENST00000564312 460 ntBASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN3Q9NQS3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN3Q9NQS3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 RPS2P55-201ENST00000397318 883 ntBASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms