Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSU72Q9NP77 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSU72Q9NP77 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSU72Q9NP77 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 AL390719.1-204ENST00000412397 1219 ntBASIC19.05■□□□□ 0.64
SSU72Q9NP77 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.05■□□□□ 0.64
SSU72Q9NP77 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSU72Q9NP77 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 AC005829.2-201ENST00000571422 1056 ntBASIC19.04■□□□□ 0.64
SSU72Q9NP77 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSU72Q9NP77 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.04■□□□□ 0.64
SSU72Q9NP77 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 AC011767.1-201ENST00000617410 1153 ntBASIC19.03■□□□□ 0.64
SSU72Q9NP77 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSU72Q9NP77 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSU72Q9NP77 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 LSM12P1-201ENST00000411836 588 ntBASIC19.02■□□□□ 0.64
SSU72Q9NP77 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.02■□□□□ 0.64
SSU72Q9NP77 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSU72Q9NP77 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms