Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR1BQ9H9Y6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 AC087388.1-201ENST00000571370 1112 ntBASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1BQ9H9Y6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 LIN28AP1-201ENST00000429574 405 ntBASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 AC104076.2-201ENST00000448912 469 ntBASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 AL031985.4-201ENST00000642138 673 ntBASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1BQ9H9Y6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 C2orf69P3-201ENST00000565542 1120 ntBASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 LETM1P2-201ENST00000597330 2178 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms