Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 NEFHP1-201ENST00000412845 2629 ntBASIC11.42□□□□□ -0.58
LIMD2Q9BT23 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 AP000974.1-201ENST00000623909 2387 ntBASIC11.42□□□□□ -0.58
LIMD2Q9BT23 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LIMD2Q9BT23 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 ME2-218ENST00000640965 2476 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 AC073210.2-201ENST00000430369 194 ntBASIC11.41□□□□□ -0.58
LIMD2Q9BT23 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 AC083906.2-201ENST00000511578 360 ntBASIC11.41□□□□□ -0.58
LIMD2Q9BT23 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 AC005332.8-201ENST00000622750 2735 ntBASIC11.41□□□□□ -0.58
LIMD2Q9BT23 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LIMD2Q9BT23 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 MIPEPP3-201ENST00000412105 444 ntBASIC11.4□□□□□ -0.58
LIMD2Q9BT23 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms