Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.78□□□□□ -0.36
LITAFQ99732 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LITAFQ99732 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 AL645608.8-201ENST00000606034 2086 ntBASIC12.78□□□□□ -0.36
LITAFQ99732 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LITAFQ99732 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LITAFQ99732 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
LITAFQ99732 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LITAFQ99732 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 AC080080.1-201ENST00000625121 2420 ntBASIC12.78□□□□□ -0.36
LITAFQ99732 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LITAFQ99732 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
LITAFQ99732 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.77□□□□□ -0.36
LITAFQ99732 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
LITAFQ99732 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.77□□□□□ -0.36
LITAFQ99732 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.77□□□□□ -0.36
LITAFQ99732 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.77□□□□□ -0.36
LITAFQ99732 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LITAFQ99732 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.77□□□□□ -0.37
LITAFQ99732 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LITAFQ99732 SLC7A5P1-201ENST00000568957 537 ntBASIC12.77□□□□□ -0.37
LITAFQ99732 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.77□□□□□ -0.37
LITAFQ99732 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LITAFQ99732 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LITAFQ99732 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
LITAFQ99732 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LITAFQ99732 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.76□□□□□ -0.37
LITAFQ99732 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 AC104187.1-201ENST00000607510 612 ntBASIC12.76□□□□□ -0.37
LITAFQ99732 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms