Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BBS4Q96RK4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS4Q96RK4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 SDHAP1-207ENST00000440850 2000 ntBASIC18.18■□□□□ 0.5
BBS4Q96RK4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 MIR4651-201ENST00000582622 73 ntBASIC18.18■□□□□ 0.5
BBS4Q96RK4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 AP000974.1-201ENST00000623909 2387 ntBASIC18.18■□□□□ 0.5
BBS4Q96RK4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
BBS4Q96RK4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BBS4Q96RK4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS4Q96RK4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 AC141586.3-201ENST00000562166 1838 ntBASIC18.17■□□□□ 0.5
BBS4Q96RK4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.17■□□□□ 0.5
BBS4Q96RK4 AC128676.1-201ENST00000454392 318 ntBASIC18.17■□□□□ 0.5
BBS4Q96RK4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 C1QL1P1-201ENST00000568105 661 ntBASIC18.17■□□□□ 0.5
BBS4Q96RK4 RN7SL471P-201ENST00000580476 299 ntBASIC18.17■□□□□ 0.5
BBS4Q96RK4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
BBS4Q96RK4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS4Q96RK4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 LINC01465-201ENST00000408887 1940 ntBASIC18.16■□□□□ 0.5
BBS4Q96RK4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS4Q96RK4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.16■□□□□ 0.5
BBS4Q96RK4 KRT16P5-201ENST00000455284 522 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms