Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF25Q93038 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 AC087289.5-201ENST00000586076 3175 ntBASIC21.83■■□□□ 1.09
TNFRSF25Q93038 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF25Q93038 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.83■■□□□ 1.08
TNFRSF25Q93038 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 AP001412.1-201ENST00000608405 714 ntBASIC21.82■■□□□ 1.08
TNFRSF25Q93038 REXO1L10P-201ENST00000615707 1290 ntBASIC21.82■■□□□ 1.08
TNFRSF25Q93038 REXO1L12P-201ENST00000622156 912 ntBASIC21.82■■□□□ 1.08
TNFRSF25Q93038 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF25Q93038 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 AC006333.2-201ENST00000607957 2099 ntBASIC21.81■■□□□ 1.08
TNFRSF25Q93038 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 TNXA-203ENST00000507684 2038 ntBASIC21.81■■□□□ 1.08
TNFRSF25Q93038 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 AP000692.2-201ENST00000608391 879 ntBASIC21.81■■□□□ 1.08
TNFRSF25Q93038 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 FSCN1P1-201ENST00000568912 1481 ntBASIC21.81■■□□□ 1.08
TNFRSF25Q93038 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF25Q93038 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 TSPY7P-201ENST00000431358 1114 ntBASIC21.8■■□□□ 1.08
TNFRSF25Q93038 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 PRSS44-201ENST00000515154 1146 ntBASIC21.8■■□□□ 1.08
TNFRSF25Q93038 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 AC026471.5-201ENST00000615068 467 ntBASIC21.8■■□□□ 1.08
TNFRSF25Q93038 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.8■■□□□ 1.08
TNFRSF25Q93038 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 CKBP1-201ENST00000565489 1086 ntBASIC21.79■■□□□ 1.08
TNFRSF25Q93038 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF25Q93038 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms