Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 AC103702.1-201ENST00000548801 2630 ntBASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 GAK-223ENST00000628912 497 ntTSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 PCDHA12-202ENST00000613593 2588 ntBASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 AL162393.1-201ENST00000437852 946 ntBASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 AL592293.1-201ENST00000502889 1188 ntBASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 OR2I1P-210ENST00000642037 4691 ntBASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SPTSSBQ8NFR3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SPTSSBQ8NFR3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.52□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms