Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 KRT16P5-201ENST00000455284 522 ntBASIC23.78■■□□□ 1.4
SMC5Q8IY18 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 Z85996.1-201ENST00000494644 937 ntBASIC23.78■■□□□ 1.4
SMC5Q8IY18 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 RN7SL471P-201ENST00000580476 299 ntBASIC23.77■■□□□ 1.4
SMC5Q8IY18 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SMC5Q8IY18 Z98044.1-201ENST00000632503 1764 ntBASIC23.77■■□□□ 1.4
SMC5Q8IY18 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC5Q8IY18 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 AC239809.2-201ENST00000415381 517 ntBASIC23.76■■□□□ 1.39
SMC5Q8IY18 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMC5Q8IY18 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC5Q8IY18 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.75■■□□□ 1.39
SMC5Q8IY18 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMC5Q8IY18 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 AC073648.6-201ENST00000641589 218 ntBASIC23.74■■□□□ 1.39
SMC5Q8IY18 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
SMC5Q8IY18 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMC5Q8IY18 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC5Q8IY18 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.73■■□□□ 1.39
SMC5Q8IY18 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMC5Q8IY18 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms