Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1LQ86WJ1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 AC239809.2-201ENST00000415381 517 ntBASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 AC124016.1-201ENST00000609552 612 ntBASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1LQ86WJ1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHD1LQ86WJ1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHD1LQ86WJ1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 RN7SL471P-201ENST00000580476 299 ntBASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD1LQ86WJ1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 AC120498.9-201ENST00000339021 3867 ntBASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 KRT16P5-201ENST00000455284 522 ntBASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 AC073648.6-201ENST00000641589 218 ntBASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD1LQ86WJ1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 AL031598.1-201ENST00000561511 1773 ntBASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 AC133681.1-201ENST00000465482 601 ntBASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 KRT8P41-201ENST00000533985 1514 ntBASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD1LQ86WJ1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1LQ86WJ1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHD1LQ86WJ1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1LQ86WJ1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms