Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
USH1GQ495M9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.04■■□□□ 1.12
USH1GQ495M9 AC007663.1-201ENST00000438948 1240 ntBASIC22.04■■□□□ 1.12
USH1GQ495M9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.04■■□□□ 1.12
USH1GQ495M9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.04■■□□□ 1.12
USH1GQ495M9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
USH1GQ495M9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.04■■□□□ 1.12
USH1GQ495M9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.04■■□□□ 1.12
USH1GQ495M9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USH1GQ495M9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
USH1GQ495M9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
USH1GQ495M9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.03■■□□□ 1.12
USH1GQ495M9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.03■■□□□ 1.12
USH1GQ495M9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.03■■□□□ 1.12
USH1GQ495M9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.03■■□□□ 1.12
USH1GQ495M9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 AL023803.3-201ENST00000615559 522 ntBASIC22.03■■□□□ 1.12
USH1GQ495M9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.03■■□□□ 1.12
USH1GQ495M9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
USH1GQ495M9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.03■■□□□ 1.12
USH1GQ495M9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.03■■□□□ 1.12
USH1GQ495M9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.03■■□□□ 1.12
USH1GQ495M9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
USH1GQ495M9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
USH1GQ495M9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.02■■□□□ 1.12
USH1GQ495M9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.02■■□□□ 1.12
USH1GQ495M9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
USH1GQ495M9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.02■■□□□ 1.12
USH1GQ495M9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.02■■□□□ 1.12
USH1GQ495M9 PRSS44-201ENST00000515154 1146 ntBASIC22.02■■□□□ 1.12
USH1GQ495M9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.02■■□□□ 1.12
USH1GQ495M9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.02■■□□□ 1.12
USH1GQ495M9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.02■■□□□ 1.12
USH1GQ495M9 AC092338.2-201ENST00000568827 1415 ntBASIC22.02■■□□□ 1.12
USH1GQ495M9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
USH1GQ495M9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
USH1GQ495M9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
USH1GQ495M9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.01■■□□□ 1.11
USH1GQ495M9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.01■■□□□ 1.11
USH1GQ495M9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 HMGA1P5-201ENST00000412453 271 ntBASIC22.01■■□□□ 1.11
USH1GQ495M9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
USH1GQ495M9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
USH1GQ495M9 TSPY23P-201ENST00000440136 739 ntBASIC22.01■■□□□ 1.11
USH1GQ495M9 AL049597.2-201ENST00000565575 961 ntBASIC22.01■■□□□ 1.11
USH1GQ495M9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
USH1GQ495M9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.01■■□□□ 1.11
USH1GQ495M9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.01■■□□□ 1.11
USH1GQ495M9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USH1GQ495M9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22■■□□□ 1.11
USH1GQ495M9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22■■□□□ 1.11
USH1GQ495M9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22■■□□□ 1.11
USH1GQ495M9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22■■□□□ 1.11
USH1GQ495M9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22■■□□□ 1.11
USH1GQ495M9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms