Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNA1P78396 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNA1P78396 TSPY21P-201ENST00000433481 731 ntBASIC21.84■■□□□ 1.09
CCNA1P78396 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNA1P78396 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNA1P78396 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.84■■□□□ 1.09
CCNA1P78396 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCNA1P78396 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNA1P78396 AC104417.2-201ENST00000562989 1793 ntBASIC21.84■■□□□ 1.09
CCNA1P78396 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNA1P78396 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCNA1P78396 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNA1P78396 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNA1P78396 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNA1P78396 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNA1P78396 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CCNA1P78396 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 HBZP1-201ENST00000354915 429 ntBASIC21.83■■□□□ 1.09
CCNA1P78396 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.83■■□□□ 1.09
CCNA1P78396 RASA4DP-201ENST00000460726 1199 ntBASIC21.83■■□□□ 1.09
CCNA1P78396 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.83■■□□□ 1.09
CCNA1P78396 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CCNA1P78396 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNA1P78396 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.83■■□□□ 1.09
CCNA1P78396 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.83■■□□□ 1.09
CCNA1P78396 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCNA1P78396 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCNA1P78396 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCNA1P78396 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCNA1P78396 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNA1P78396 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNA1P78396 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 AL162377.1-201ENST00000618844 1793 ntBASIC21.82■■□□□ 1.08
CCNA1P78396 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CCNA1P78396 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNA1P78396 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCNA1P78396 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNA1P78396 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNA1P78396 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNA1P78396 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNA1P78396 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNA1P78396 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNA1P78396 AL645929.1-201ENST00000420084 975 ntBASIC21.81■■□□□ 1.08
CCNA1P78396 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.81■■□□□ 1.08
CCNA1P78396 TSPY23P-201ENST00000440136 739 ntBASIC21.81■■□□□ 1.08
CCNA1P78396 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.81■■□□□ 1.08
CCNA1P78396 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCNA1P78396 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCNA1P78396 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCNA1P78396 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 ZNF815P-204ENST00000434898 1737 ntBASIC21.8■■□□□ 1.08
CCNA1P78396 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCNA1P78396 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCNA1P78396 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.8■■□□□ 1.08
CCNA1P78396 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms