Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 YBX1P2-201ENST00000489612 999 ntBASIC18.96■□□□□ 0.63
CLDN2P57739 AC063952.2-201ENST00000498792 1227 ntBASIC18.96■□□□□ 0.63
CLDN2P57739 PRSS44-201ENST00000515154 1146 ntBASIC18.96■□□□□ 0.63
CLDN2P57739 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN2P57739 AC022616.7-201ENST00000525383 220 ntBASIC18.96■□□□□ 0.63
CLDN2P57739 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN2P57739 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CLDN2P57739 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN2P57739 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN2P57739 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN2P57739 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN2P57739 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLDN2P57739 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN2P57739 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN2P57739 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN2P57739 COX11P1-201ENST00000489116 835 ntBASIC18.95■□□□□ 0.62
CLDN2P57739 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN2P57739 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN2P57739 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN2P57739 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN2P57739 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN2P57739 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN2P57739 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN2P57739 KRT8P45-201ENST00000414328 1447 ntBASIC18.94■□□□□ 0.62
CLDN2P57739 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN2P57739 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 RNF152P1-201ENST00000397754 604 ntBASIC18.94■□□□□ 0.62
CLDN2P57739 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLDN2P57739 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN2P57739 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN2P57739 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN2P57739 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.94■□□□□ 0.62
CLDN2P57739 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN2P57739 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN2P57739 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN2P57739 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN2P57739 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN2P57739 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLDN2P57739 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN2P57739 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.93■□□□□ 0.62
CLDN2P57739 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN2P57739 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN2P57739 AC011558.1-201ENST00000623459 338 ntBASIC18.93■□□□□ 0.62
CLDN2P57739 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN2P57739 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN2P57739 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN2P57739 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN2P57739 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN2P57739 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN2P57739 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN2P57739 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN2P57739 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN2P57739 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms