Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 AL158047.1-201ENST00000445918 881 ntBASIC17.07■□□□□ 0.32
CSNK1A1P48729 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 TEX21P-204ENST00000641479 1693 ntBASIC17.07■□□□□ 0.32
CSNK1A1P48729 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 NIFKP9-201ENST00000419265 221 ntBASIC17.06■□□□□ 0.32
CSNK1A1P48729 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 AC098590.1-201ENST00000468126 897 ntBASIC17.06■□□□□ 0.32
CSNK1A1P48729 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 RARRES2P10-201ENST00000564312 460 ntBASIC17.06■□□□□ 0.32
CSNK1A1P48729 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.06■□□□□ 0.32
CSNK1A1P48729 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CSNK1A1P48729 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CSNK1A1P48729 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AC141586.3-201ENST00000562166 1838 ntBASIC17.05■□□□□ 0.32
CSNK1A1P48729 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 GCSHP5-201ENST00000443090 522 ntBASIC17.05■□□□□ 0.32
CSNK1A1P48729 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AL353708.3-201ENST00000610272 989 ntBASIC17.05■□□□□ 0.32
CSNK1A1P48729 AL445675.2-201ENST00000620291 557 ntBASIC17.05■□□□□ 0.32
CSNK1A1P48729 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1A1P48729 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1A1P48729 BCL2-203ENST00000589955 5011 ntBASIC17.05■□□□□ 0.32
CSNK1A1P48729 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1A1P48729 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms