Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NKX2-1P43699 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 YBX1P1-201ENST00000445822 960 ntBASIC15.71■□□□□ 0.11
NKX2-1P43699 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.71■□□□□ 0.11
NKX2-1P43699 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.71■□□□□ 0.11
NKX2-1P43699 AC100791.3-201ENST00000617619 330 ntBASIC15.71■□□□□ 0.11
NKX2-1P43699 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX2-1P43699 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX2-1P43699 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NKX2-1P43699 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NKX2-1P43699 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NKX2-1P43699 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX2-1P43699 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.71■□□□□ 0.1
NKX2-1P43699 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NKX2-1P43699 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.71■□□□□ 0.1
NKX2-1P43699 ZNF815P-204ENST00000434898 1737 ntBASIC15.71■□□□□ 0.1
NKX2-1P43699 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NKX2-1P43699 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX2-1P43699 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX2-1P43699 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NKX2-1P43699 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 AC023632.3-201ENST00000521633 145 ntBASIC15.7■□□□□ 0.1
NKX2-1P43699 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.7■□□□□ 0.1
NKX2-1P43699 AC016405.3-201ENST00000607710 860 ntBASIC15.7■□□□□ 0.1
NKX2-1P43699 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NKX2-1P43699 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 IRX1P1-201ENST00000438849 1838 ntBASIC15.7■□□□□ 0.1
NKX2-1P43699 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 AC018553.1-201ENST00000616682 1458 ntBASIC15.7■□□□□ 0.1
NKX2-1P43699 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX2-1P43699 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NKX2-1P43699 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-1P43699 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-1P43699 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-1P43699 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX2-1P43699 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-1P43699 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.69■□□□□ 0.1
NKX2-1P43699 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.69■□□□□ 0.1
NKX2-1P43699 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 FZD10-202ENST00000539839 3282 ntBASIC15.69■□□□□ 0.1
NKX2-1P43699 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-1P43699 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-1P43699 AC020916.1-201ENST00000587762 1774 ntBASIC15.69■□□□□ 0.1
NKX2-1P43699 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms