Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.66■□□□□ 0.424e-8■■■■□ 20.9
RPS3P23396 VPS72-206ENST00000496809 913 ntTSL 511.9□□□□□ -0.54e-8■■■■□ 20.9
RPS3P23396 DCTN1-223ENST00000495643 673 ntTSL 310.62□□□□□ -0.715e-6■■■■□ 20.9
RPS3P23396 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.09■□□□□ 0.171e-8■■■■□ 20.9
RPS3P23396 PHGDH-228ENST00000641847 692 nt9.23□□□□□ -0.932e-18■■■■□ 20.9
RPS3P23396 HM13-210ENST00000466766 358 ntTSL 212.96□□□□□ -0.339e-11■■■■□ 20.9
RPS3P23396 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.273e-7■■■■□ 20.9
RPS3P23396 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.233e-7■■■■□ 20.9
RPS3P23396 PHB-208ENST00000507748 582 ntTSL 1 (best)4.51□□□□□ -1.696e-14■■■■□ 20.9
RPS3P23396 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC9.15□□□□□ -0.944e-6■■■■□ 20.9
RPS3P23396 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.78□□□□□ -0.26e-7■■■■□ 20.8
RPS3P23396 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.86■□□□□ 0.455e-9■■■■□ 20.8
RPS3P23396 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.78■□□□□ 0.285e-9■■■■□ 20.8
RPS3P23396 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.51■□□□□ 0.716e-15■■■■□ 20.8
RPS3P23396 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.686e-15■■■■□ 20.8
RPS3P23396 DUT-206ENST00000558978 1171 ntTSL 318.35■□□□□ 0.536e-15■■■■□ 20.8
RPS3P23396 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.25■□□□□ 0.516e-15■■■■□ 20.8
RPS3P23396 DUT-204ENST00000558472 724 ntTSL 317.21■□□□□ 0.356e-15■■■■□ 20.8
RPS3P23396 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.42■□□□□ 0.066e-15■■■■□ 20.8
RPS3P23396 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.05□□□□□ -0.166e-15■■■■□ 20.8
RPS3P23396 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.82□□□□□ -0.366e-15■■■■□ 20.8
RPS3P23396 CLSTN3-206ENST00000535668 566 ntTSL 310.75□□□□□ -0.698e-7■■■■□ 20.8
RPS3P23396 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.236e-7■■■■□ 20.8
RPS3P23396 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.96e-7■■■■□ 20.8
RPS3P23396 EML2-205ENST00000586195 1952 ntTSL 220.58■□□□□ 0.896e-7■■■■□ 20.8
RPS3P23396 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.76e-7■■■■□ 20.8
RPS3P23396 EML2-215ENST00000588308 2062 ntTSL 219.12■□□□□ 0.656e-7■■■■□ 20.8
RPS3P23396 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.266e-7■■■■□ 20.8
RPS3P23396 UQCRC2-204ENST00000563711 2008 ntTSL 27.62□□□□□ -1.192e-11■■■■□ 20.8
RPS3P23396 TGFBI-211ENST00000513497 588 ntTSL 210.64□□□□□ -0.713e-8■■■■□ 20.8
RPS3P23396 POLR2A-204ENST00000575547 702 ntTSL 36.27□□□□□ -1.418e-8■■■■□ 20.8
RPS3P23396 PRPF19-206ENST00000541371 943 ntTSL 312.63□□□□□ -0.398e-7■■■■□ 20.8
RPS3P23396 PSAP-204ENST00000495196 344 ntTSL 211.78□□□□□ -0.524e-27■■■■□ 20.8
RPS3P23396 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.928e-9■■■■□ 20.8
RPS3P23396 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.38e-9■■■■□ 20.8
RPS3P23396 P4HB-224ENST00000576541 571 ntTSL 520.3■□□□□ 0.847e-21■■■■□ 20.8
RPS3P23396 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.523e-7■■■■□ 20.8
RPS3P23396 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)14.52□□□□□ -0.083e-7■■■■□ 20.8
RPS3P23396 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.078e-8■■■■□ 20.8
RPS3P23396 USP10-202ENST00000540269 3070 ntTSL 1 (best)12.18□□□□□ -0.468e-8■■■■□ 20.8
RPS3P23396 USP10-219ENST00000570191 2717 ntTSL 2 BASIC11.34□□□□□ -0.598e-8■■■■□ 20.8
RPS3P23396 PSMA5-202ENST00000477897 275 ntTSL 22.03□□□□□ -2.087e-8■■■■□ 20.8
RPS3P23396 EEF1D-252ENST00000534377 617 ntTSL 214.3□□□□□ -0.127e-8■■■■□ 20.8
RPS3P23396 P4HB-219ENST00000574914 571 ntTSL 420.3■□□□□ 0.847e-21■■■■□ 20.8
RPS3P23396 TMBIM1-211ENST00000440422 659 ntTSL 522.21■■□□□ 1.151e-8■■■■□ 20.8
RPS3P23396 TMBIM1-213ENST00000444183 526 ntTSL 513.25□□□□□ -0.291e-8■■■■□ 20.8
RPS3P23396 TMBIM1-217ENST00000453281 534 ntTSL 213.25□□□□□ -0.291e-8■■■■□ 20.8
RPS3P23396 TMBIM1-218ENST00000453776 561 ntTSL 312.88□□□□□ -0.351e-8■■■■□ 20.8
RPS3P23396 TMBIM1-212ENST00000444000 571 ntTSL 410.7□□□□□ -0.71e-8■■■■□ 20.8
RPS3P23396 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.011e-7■■■■□ 20.8
RPS3P23396 PIGT-226ENST00000638691 823 ntTSL 313.06□□□□□ -0.322e-7■■■■□ 20.8
RPS3P23396 PIGT-254ENST00000640123 847 ntTSL 513.06□□□□□ -0.322e-7■■■■□ 20.8
RPS3P23396 PIGT-204ENST00000424705 2046 ntTSL 511.78□□□□□ -0.522e-7■■■■□ 20.8
RPS3P23396 PIGT-258ENST00000640253 1418 ntTSL 210.76□□□□□ -0.692e-7■■■■□ 20.8
RPS3P23396 PIGT-210ENST00000638241 2006 ntTSL 29.7□□□□□ -0.862e-7■■■■□ 20.8
RPS3P23396 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.53□□□□□ -0.085e-7■■■■□ 20.8
RPS3P23396 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.515e-7■■■■□ 20.8
RPS3P23396 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.393e-30■■■■□ 20.8
RPS3P23396 TMBIM1-216ENST00000451181 464 ntTSL 512.12□□□□□ -0.471e-8■■■■□ 20.8
RPS3P23396 ATP6AP1-203ENST00000429585 769 ntTSL 523.53■■□□□ 1.365e-8■■■■□ 20.8
RPS3P23396 ATP6AP1-202ENST00000422890 867 ntTSL 519.07■□□□□ 0.645e-8■■■■□ 20.8
RPS3P23396 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.384e-7■■■■□ 20.8
RPS3P23396 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.77■■□□□ 1.084e-7■■■■□ 20.8
RPS3P23396 EPCAM-204ENST00000456133 1501 ntTSL 512.53□□□□□ -0.44e-7■■■■□ 20.8
RPS3P23396 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.474e-13■■■■□ 20.8
RPS3P23396 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.37□□□□□ -0.114e-13■■■■□ 20.8
RPS3P23396 COPE-206ENST00000597026 678 ntTSL 215.57■□□□□ 0.082e-11■■■■□ 20.8
RPS3P23396 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.05□□□□□ -0.161e-6■■■■□ 20.8
RPS3P23396 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.831e-6■■■■□ 20.8
RPS3P23396 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC9.34□□□□□ -0.911e-6■■■■□ 20.8
RPS3P23396 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.493e-8■■■■□ 20.8
RPS3P23396 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.313e-8■■■■□ 20.8
RPS3P23396 HSP90B1-202ENST00000540297 590 ntTSL 319.39■□□□□ 0.692e-72■■■■□ 20.8
RPS3P23396 HSP90B1-205ENST00000549334 581 ntTSL 416.72■□□□□ 0.272e-72■■■■□ 20.8
RPS3P23396 HSP90B1-204ENST00000548622 839 ntTSL 216.4■□□□□ 0.222e-72■■■■□ 20.8
RPS3P23396 PSMD13-211ENST00000532025 653 ntTSL 316.58■□□□□ 0.244e-7■■■■□ 20.8
RPS3P23396 PSMD13-210ENST00000529679 507 ntTSL 29.18□□□□□ -0.944e-7■■■■□ 20.8
RPS3P23396 CRELD2-209ENST00000483652 1994 ntTSL 1 (best)19.02■□□□□ 0.647e-8■■■■□ 20.8
RPS3P23396 AC068205.2-203ENST00000529261 748 ntTSL 38.93□□□□□ -0.981e-6■■■■□ 20.8
RPS3P23396 PRMT5-218ENST00000555454 771 ntTSL 57.43□□□□□ -1.224e-7■■■■□ 20.8
RPS3P23396 PRMT5-206ENST00000454731 617 ntTSL 36.42□□□□□ -1.384e-7■■■■□ 20.8
RPS3P23396 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.811e-12■■■■□ 20.8
RPS3P23396 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.621e-12■■■■□ 20.8
RPS3P23396 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.621e-12■■■■□ 20.8
RPS3P23396 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 01e-12■■■■□ 20.8
RPS3P23396 LGR5-206ENST00000550851 4095 ntTSL 211.21□□□□□ -0.619e-7■■■■□ 20.8
RPS3P23396 RRM2-210ENST00000498343 560 ntTSL 211.73□□□□□ -0.532e-9■■■■□ 20.8
RPS3P23396 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.697e-8■■■■□ 20.7
RPS3P23396 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.897e-8■■■■□ 20.7
RPS3P23396 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.047e-8■■■■□ 20.7
RPS3P23396 ANXA2-205ENST00000504475 3528 ntTSL 28.57□□□□□ -1.047e-8■■■■□ 20.7
RPS3P23396 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.097e-8■■■■□ 20.7
RPS3P23396 ANXA2-228ENST00000560014 2339 ntTSL 28.09□□□□□ -1.117e-8■■■■□ 20.7
RPS3P23396 SEMA3B-211ENST00000612509 1061 ntTSL 517.63■□□□□ 0.411e-6■■■■□ 20.7
RPS3P23396 DDB1-220ENST00000542337 558 ntTSL 319.51■□□□□ 0.719e-7■■■■□ 20.7
RPS3P23396 CAPNS1-212ENST00000591041 812 ntTSL 322.52■■□□□ 1.23e-8■■■■□ 20.7
RPS3P23396 CLPTM1-211ENST00000589347 638 ntTSL 310.28□□□□□ -0.764e-6■■■■□ 20.7
RPS3P23396 HMBS-204ENST00000534956 547 ntTSL 55.65□□□□□ -1.51e-6■■■■□ 20.7
RPS3P23396 ETFA-213ENST00000560309 633 ntTSL 319.91■□□□□ 0.783e-8■■■■□ 20.7
RPS3P23396 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.241e-8■■■■□ 20.7
Retrieved 100 of 24,271 protein–RNA pairs in 251.3 ms