Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCL4P13236 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.13■□□□□ 0.49
CCL4P13236 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CCL4P13236 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL4P13236 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL4P13236 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCL4P13236 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.12■□□□□ 0.49
CCL4P13236 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCL4P13236 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 STARP1-201ENST00000397973 869 ntBASIC18.12■□□□□ 0.49
CCL4P13236 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL4P13236 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL4P13236 ZNF444P1-201ENST00000559497 298 ntBASIC18.12■□□□□ 0.49
CCL4P13236 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.12■□□□□ 0.49
CCL4P13236 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.12■□□□□ 0.49
CCL4P13236 CR769767.2-201ENST00000622735 460 ntBASIC18.12■□□□□ 0.49
CCL4P13236 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.12■□□□□ 0.49
CCL4P13236 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.12■□□□□ 0.49
CCL4P13236 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL4P13236 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL4P13236 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCL4P13236 SDHAP1-207ENST00000440850 2000 ntBASIC18.11■□□□□ 0.49
CCL4P13236 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCL4P13236 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 SPDYE15P-201ENST00000424157 909 ntBASIC18.11■□□□□ 0.49
CCL4P13236 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.11■□□□□ 0.49
CCL4P13236 TSPY23P-201ENST00000440136 739 ntBASIC18.11■□□□□ 0.49
CCL4P13236 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.11■□□□□ 0.49
CCL4P13236 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.11■□□□□ 0.49
CCL4P13236 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.11■□□□□ 0.49
CCL4P13236 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 LINC01311-201ENST00000565162 1445 ntBASIC18.11■□□□□ 0.49
CCL4P13236 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCL4P13236 TCF3P1-201ENST00000423021 1937 ntBASIC18.11■□□□□ 0.49
CCL4P13236 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
CCL4P13236 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCL4P13236 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CCL4P13236 AC112907.3-201ENST00000577781 2400 ntBASIC18.11■□□□□ 0.49
CCL4P13236 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL4P13236 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CCL4P13236 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.1■□□□□ 0.49
CCL4P13236 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.1■□□□□ 0.49
CCL4P13236 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCL4P13236 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
CCL4P13236 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 LINC01006-201ENST00000333319 2292 ntBASIC18.1■□□□□ 0.49
CCL4P13236 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL4P13236 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL4P13236 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCL4P13236 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL4P13236 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL4P13236 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL4P13236 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL4P13236 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.09■□□□□ 0.49
CCL4P13236 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL4P13236 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCL4P13236 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms