Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.89■□□□□ 0.78
RHOP08100 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.89■□□□□ 0.77
RHOP08100 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.89■□□□□ 0.77
RHOP08100 TCF3P1-201ENST00000423021 1937 ntBASIC19.89■□□□□ 0.77
RHOP08100 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.89■□□□□ 0.77
RHOP08100 KRT18P48-201ENST00000434763 852 ntBASIC19.89■□□□□ 0.77
RHOP08100 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RHOP08100 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RHOP08100 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.89■□□□□ 0.77
RHOP08100 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.89■□□□□ 0.77
RHOP08100 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 LINC01311-201ENST00000565162 1445 ntBASIC19.89■□□□□ 0.77
RHOP08100 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 AC069148.1-201ENST00000608741 768 ntBASIC19.89■□□□□ 0.77
RHOP08100 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.89■□□□□ 0.77
RHOP08100 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.89■□□□□ 0.77
RHOP08100 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHOP08100 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RHOP08100 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RHOP08100 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RHOP08100 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RHOP08100 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.88■□□□□ 0.77
RHOP08100 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.88■□□□□ 0.77
RHOP08100 SPDYE15P-201ENST00000424157 909 ntBASIC19.88■□□□□ 0.77
RHOP08100 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.88■□□□□ 0.77
RHOP08100 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.88■□□□□ 0.77
RHOP08100 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.88■□□□□ 0.77
RHOP08100 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 SDHAP1-207ENST00000440850 2000 ntBASIC19.88■□□□□ 0.77
RHOP08100 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHOP08100 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RHOP08100 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.87■□□□□ 0.77
RHOP08100 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 TSPY21P-201ENST00000433481 731 ntBASIC19.87■□□□□ 0.77
RHOP08100 HCG4P8-203ENST00000443049 980 ntBASIC19.87■□□□□ 0.77
RHOP08100 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.87■□□□□ 0.77
RHOP08100 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.87■□□□□ 0.77
RHOP08100 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RHOP08100 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RHOP08100 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.87■□□□□ 0.77
RHOP08100 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHOP08100 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.86■□□□□ 0.77
RHOP08100 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RHOP08100 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.86■□□□□ 0.77
RHOP08100 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.86■□□□□ 0.77
RHOP08100 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RHOP08100 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHOP08100 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms