Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CAPN1P07384 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.87■□□□□ 0.61
CAPN1P07384 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN1P07384 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CAPN1P07384 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CAPN1P07384 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN1P07384 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN1P07384 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CAPN1P07384 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.86■□□□□ 0.61
CAPN1P07384 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN1P07384 AL049637.2-201ENST00000641778 930 ntBASIC18.86■□□□□ 0.61
CAPN1P07384 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN1P07384 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN1P07384 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN1P07384 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CAPN1P07384 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
CAPN1P07384 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 LINC01465-201ENST00000408887 1940 ntBASIC18.85■□□□□ 0.61
CAPN1P07384 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.85■□□□□ 0.61
CAPN1P07384 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CAPN1P07384 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.85■□□□□ 0.61
CAPN1P07384 RARRES2P10-201ENST00000564312 460 ntBASIC18.85■□□□□ 0.61
CAPN1P07384 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CAPN1P07384 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN1P07384 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CAPN1P07384 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN1P07384 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN1P07384 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN1P07384 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN1P07384 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CAPN1P07384 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CAPN1P07384 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.84■□□□□ 0.61
CAPN1P07384 TSPY7P-201ENST00000431358 1114 ntBASIC18.84■□□□□ 0.61
CAPN1P07384 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.84■□□□□ 0.61
CAPN1P07384 PRKY-204ENST00000533551 1019 ntBASIC18.84■□□□□ 0.61
CAPN1P07384 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN1P07384 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN1P07384 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN1P07384 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN1P07384 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CAPN1P07384 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.83■□□□□ 0.61
CAPN1P07384 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN1P07384 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.83■□□□□ 0.61
CAPN1P07384 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms