Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TCRAP04437 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TCRAP04437 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRAP04437 CNN2P6-201ENST00000439038 900 ntBASIC14.61□□□□□ -0.07
TCRAP04437 NTF6G-201ENST00000591094 616 ntBASIC14.61□□□□□ -0.07
TCRAP04437 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.61□□□□□ -0.07
TCRAP04437 AC008694.1-202ENST00000636953 945 ntBASIC14.61□□□□□ -0.07
TCRAP04437 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 HTR7P1-202ENST00000624664 4411 ntBASIC14.61□□□□□ -0.07
TCRAP04437 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRAP04437 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRAP04437 NOC2LP1-202ENST00000452600 2235 ntBASIC14.61□□□□□ -0.07
TCRAP04437 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRAP04437 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 SDHAP1-207ENST00000440850 2000 ntBASIC14.6□□□□□ -0.07
TCRAP04437 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.6□□□□□ -0.07
TCRAP04437 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRAP04437 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TCRAP04437 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRAP04437 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRAP04437 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TCRAP04437 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRAP04437 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TCRAP04437 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
TCRAP04437 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRAP04437 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PCDHB18P-201ENST00000524813 2368 ntBASIC14.59□□□□□ -0.07
TCRAP04437 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 NOC2LP2-201ENST00000407594 1944 ntBASIC14.59□□□□□ -0.07
TCRAP04437 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TCRAP04437 CYP2T1P-201ENST00000432607 1285 ntBASIC14.59□□□□□ -0.07
TCRAP04437 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRAP04437 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.59□□□□□ -0.07
TCRAP04437 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 AC104417.2-201ENST00000562989 1793 ntBASIC14.59□□□□□ -0.07
TCRAP04437 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TCRAP04437 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TCRAP04437 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRAP04437 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRAP04437 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.58□□□□□ -0.07
TCRAP04437 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TCRAP04437 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms