Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.9■■□□□ 1.1
MYCNP04198 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.9■■□□□ 1.1
MYCNP04198 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
MYCNP04198 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
MYCNP04198 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC21.9■■□□□ 1.1
MYCNP04198 KRT18P48-201ENST00000434763 852 ntBASIC21.9■■□□□ 1.1
MYCNP04198 AC009947.2-201ENST00000444014 672 ntBASIC21.9■■□□□ 1.1
MYCNP04198 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC21.9■■□□□ 1.1
MYCNP04198 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC21.9■■□□□ 1.1
MYCNP04198 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.9■■□□□ 1.1
MYCNP04198 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.9■■□□□ 1.1
MYCNP04198 AC140113.3-201ENST00000605663 199 ntBASIC21.9■■□□□ 1.1
MYCNP04198 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.9■■□□□ 1.1
MYCNP04198 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC21.9■■□□□ 1.1
MYCNP04198 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.9■■□□□ 1.1
MYCNP04198 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.9■■□□□ 1.1
MYCNP04198 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MYCNP04198 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MYCNP04198 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MYCNP04198 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
MYCNP04198 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
MYCNP04198 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MYCNP04198 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MYCNP04198 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.89■■□□□ 1.09
MYCNP04198 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
MYCNP04198 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC21.89■■□□□ 1.09
MYCNP04198 SLC25A1P2-201ENST00000430693 912 ntBASIC21.89■■□□□ 1.09
MYCNP04198 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.89■■□□□ 1.09
MYCNP04198 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.89■■□□□ 1.09
MYCNP04198 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.89■■□□□ 1.09
MYCNP04198 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MYCNP04198 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 IER3-202ENST00000376377 1350 ntBASIC21.88■■□□□ 1.09
MYCNP04198 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
MYCNP04198 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.88■■□□□ 1.09
MYCNP04198 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.88■■□□□ 1.09
MYCNP04198 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.88■■□□□ 1.09
MYCNP04198 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 AC122134.1-202ENST00000569111 1201 ntBASIC21.88■■□□□ 1.09
MYCNP04198 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MYCNP04198 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
MYCNP04198 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
MYCNP04198 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.87■■□□□ 1.09
MYCNP04198 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
MYCNP04198 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC21.87■■□□□ 1.09
MYCNP04198 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.87■■□□□ 1.09
MYCNP04198 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.87■■□□□ 1.09
MYCNP04198 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.87■■□□□ 1.09
MYCNP04198 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
MYCNP04198 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MYCNP04198 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.87■■□□□ 1.09
MYCNP04198 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.86■■□□□ 1.09
MYCNP04198 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MYCNP04198 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MYCNP04198 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MYCNP04198 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MYCNP04198 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MYCNP04198 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
MYCNP04198 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MYCNP04198 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.86■■□□□ 1.09
MYCNP04198 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
MYCNP04198 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms