Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.65■□□□□ 0.74
TOP3BO95985 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.65■□□□□ 0.74
TOP3BO95985 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TOP3BO95985 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TOP3BO95985 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TOP3BO95985 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TOP3BO95985 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TOP3BO95985 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.64■□□□□ 0.74
TOP3BO95985 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TOP3BO95985 AL137013.1-201ENST00000432946 1228 ntBASIC19.64■□□□□ 0.73
TOP3BO95985 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 AC005829.2-201ENST00000571422 1056 ntBASIC19.64■□□□□ 0.73
TOP3BO95985 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TOP3BO95985 HTR7P1-201ENST00000538670 1336 ntBASIC19.64■□□□□ 0.73
TOP3BO95985 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 AC073508.3-201ENST00000619697 1419 ntBASIC19.64■□□□□ 0.73
TOP3BO95985 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TOP3BO95985 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.64■□□□□ 0.73
TOP3BO95985 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
TOP3BO95985 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.64■□□□□ 0.73
TOP3BO95985 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TOP3BO95985 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.64■□□□□ 0.73
TOP3BO95985 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TOP3BO95985 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.64■□□□□ 0.73
TOP3BO95985 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.63■□□□□ 0.73
TOP3BO95985 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
TOP3BO95985 MIR1238-201ENST00000408483 83 ntBASIC19.63■□□□□ 0.73
TOP3BO95985 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.63■□□□□ 0.73
TOP3BO95985 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 WWOX-216ENST00000569818 525 ntBASIC19.63■□□□□ 0.73
TOP3BO95985 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TOP3BO95985 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.63■□□□□ 0.73
TOP3BO95985 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TOP3BO95985 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TOP3BO95985 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
TOP3BO95985 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TOP3BO95985 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 CYP2D8P-201ENST00000433633 1490 ntBASIC19.62■□□□□ 0.73
TOP3BO95985 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.62■□□□□ 0.73
TOP3BO95985 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TOP3BO95985 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TOP3BO95985 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.62■□□□□ 0.73
TOP3BO95985 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP3BO95985 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
TOP3BO95985 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.62■□□□□ 0.73
TOP3BO95985 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.62■□□□□ 0.73
TOP3BO95985 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP3BO95985 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP3BO95985 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.62■□□□□ 0.73
TOP3BO95985 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TOP3BO95985 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 KRT8P20-201ENST00000423953 1409 ntBASIC19.61■□□□□ 0.73
TOP3BO95985 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.61■□□□□ 0.73
TOP3BO95985 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP3BO95985 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TOP3BO95985 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.61■□□□□ 0.73
TOP3BO95985 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.61■□□□□ 0.73
TOP3BO95985 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
TOP3BO95985 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms