Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.29■□□□□ 0.68
VAPBO95292 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.29■□□□□ 0.68
VAPBO95292 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.29■□□□□ 0.68
VAPBO95292 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.29■□□□□ 0.68
VAPBO95292 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.29■□□□□ 0.68
VAPBO95292 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.29■□□□□ 0.68
VAPBO95292 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 AC004264.1-201ENST00000608354 794 ntBASIC19.29■□□□□ 0.68
VAPBO95292 AL023875.1-201ENST00000640777 796 ntBASIC19.29■□□□□ 0.68
VAPBO95292 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.29■□□□□ 0.68
VAPBO95292 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.29■□□□□ 0.68
VAPBO95292 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.29■□□□□ 0.68
VAPBO95292 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VAPBO95292 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VAPBO95292 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VAPBO95292 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VAPBO95292 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.28■□□□□ 0.68
VAPBO95292 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.28■□□□□ 0.68
VAPBO95292 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.28■□□□□ 0.68
VAPBO95292 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VAPBO95292 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
VAPBO95292 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VAPBO95292 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VAPBO95292 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VAPBO95292 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
VAPBO95292 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.27■□□□□ 0.68
VAPBO95292 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VAPBO95292 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
VAPBO95292 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VAPBO95292 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.26■□□□□ 0.67
VAPBO95292 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
VAPBO95292 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VAPBO95292 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.26■□□□□ 0.67
VAPBO95292 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VAPBO95292 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VAPBO95292 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 KRASP1-201ENST00000407852 552 ntBASIC19.26■□□□□ 0.67
VAPBO95292 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
VAPBO95292 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.26■□□□□ 0.67
VAPBO95292 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VAPBO95292 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VAPBO95292 C1QL1P1-201ENST00000568105 661 ntBASIC19.26■□□□□ 0.67
VAPBO95292 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.26■□□□□ 0.67
VAPBO95292 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VAPBO95292 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms