Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ZNF253O75346 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
ZNF253O75346 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF253O75346 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ZNF253O75346 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.93□□□□□ -0.02
ZNF253O75346 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZNF253O75346 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.93□□□□□ -0.02
ZNF253O75346 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ZNF253O75346 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 AC016769.1-201ENST00000409132 1010 ntBASIC14.92□□□□□ -0.02
ZNF253O75346 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.92□□□□□ -0.02
ZNF253O75346 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.92□□□□□ -0.02
ZNF253O75346 CYP2T1P-201ENST00000432607 1285 ntBASIC14.92□□□□□ -0.02
ZNF253O75346 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.92□□□□□ -0.02
ZNF253O75346 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.92□□□□□ -0.02
ZNF253O75346 MIR6821-201ENST00000617625 74 ntBASIC14.92□□□□□ -0.02
ZNF253O75346 OR10C1-204ENST00000622521 1039 ntBASIC14.92□□□□□ -0.02
ZNF253O75346 AC231657.2-201ENST00000624556 255 ntBASIC14.92□□□□□ -0.02
ZNF253O75346 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ZNF253O75346 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF253O75346 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF253O75346 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.92□□□□□ -0.02
ZNF253O75346 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZNF253O75346 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF253O75346 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ZNF253O75346 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ZNF253O75346 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.91□□□□□ -0.02
ZNF253O75346 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ZNF253O75346 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.91□□□□□ -0.02
ZNF253O75346 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZNF253O75346 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms