Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
EXTL3O43909 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.84■□□□□ 0.93
EXTL3O43909 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.84■□□□□ 0.93
EXTL3O43909 AL355075.4-201ENST00000554988 638 ntBASIC20.84■□□□□ 0.93
EXTL3O43909 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.84■□□□□ 0.93
EXTL3O43909 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.84■□□□□ 0.93
EXTL3O43909 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.84■□□□□ 0.93
EXTL3O43909 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.84■□□□□ 0.93
EXTL3O43909 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXTL3O43909 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXTL3O43909 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.84■□□□□ 0.93
EXTL3O43909 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXTL3O43909 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXTL3O43909 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
EXTL3O43909 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.83■□□□□ 0.93
EXTL3O43909 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
EXTL3O43909 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
EXTL3O43909 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.83■□□□□ 0.93
EXTL3O43909 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
EXTL3O43909 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
EXTL3O43909 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
EXTL3O43909 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.83■□□□□ 0.93
EXTL3O43909 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.83■□□□□ 0.93
EXTL3O43909 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXTL3O43909 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
EXTL3O43909 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.83■□□□□ 0.92
EXTL3O43909 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXTL3O43909 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXTL3O43909 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXTL3O43909 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXTL3O43909 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EXTL3O43909 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.82■□□□□ 0.92
EXTL3O43909 PRSS44-201ENST00000515154 1146 ntBASIC20.82■□□□□ 0.92
EXTL3O43909 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.82■□□□□ 0.92
EXTL3O43909 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.82■□□□□ 0.92
EXTL3O43909 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.82■□□□□ 0.92
EXTL3O43909 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXTL3O43909 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.81■□□□□ 0.92
EXTL3O43909 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
EXTL3O43909 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
EXTL3O43909 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 UNC93B2-201ENST00000285383 730 ntBASIC20.81■□□□□ 0.92
EXTL3O43909 TSPY15P-201ENST00000457163 923 ntBASIC20.81■□□□□ 0.92
EXTL3O43909 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.81■□□□□ 0.92
EXTL3O43909 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.81■□□□□ 0.92
EXTL3O43909 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.81■□□□□ 0.92
EXTL3O43909 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.81■□□□□ 0.92
EXTL3O43909 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXTL3O43909 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.81■□□□□ 0.92
EXTL3O43909 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.81■□□□□ 0.92
EXTL3O43909 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.8■□□□□ 0.92
EXTL3O43909 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.8■□□□□ 0.92
EXTL3O43909 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EXTL3O43909 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
EXTL3O43909 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
EXTL3O43909 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXTL3O43909 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.8■□□□□ 0.92
EXTL3O43909 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms