Protein–RNA interactions for Protein: I3L3M4

Claudin, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
I3L3M4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 WIZP1-201ENST00000531444 2299 ntBASIC13.66□□□□□ -0.22
I3L3M4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 AL031598.1-201ENST00000561511 1773 ntBASIC13.66□□□□□ -0.22
I3L3M4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.66□□□□□ -0.22
I3L3M4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 AC135050.7-201ENST00000624508 2218 ntBASIC13.66□□□□□ -0.22
I3L3M4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 MIR638-201ENST00000385237 100 ntBASIC13.66□□□□□ -0.22
I3L3M4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 AL355472.2-201ENST00000422958 438 ntBASIC13.66□□□□□ -0.22
I3L3M4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.66□□□□□ -0.22
I3L3M4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.66□□□□□ -0.22
I3L3M4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.66□□□□□ -0.22
I3L3M4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 IRX1P1-201ENST00000438849 1838 ntBASIC13.66□□□□□ -0.22
I3L3M4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.66□□□□□ -0.22
I3L3M4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.66□□□□□ -0.22
I3L3M4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
I3L3M4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.65□□□□□ -0.22
I3L3M4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
I3L3M4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.65□□□□□ -0.22
I3L3M4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.65□□□□□ -0.22
I3L3M4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.65□□□□□ -0.22
I3L3M4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.65□□□□□ -0.22
I3L3M4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 TFP1-202ENST00000475455 1573 ntBASIC13.65□□□□□ -0.22
I3L3M4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.65□□□□□ -0.22
I3L3M4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.65□□□□□ -0.22
I3L3M4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
I3L3M4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
I3L3M4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
I3L3M4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.64□□□□□ -0.23
I3L3M4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.64□□□□□ -0.23
I3L3M4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
I3L3M4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
I3L3M4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
I3L3M4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms