Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 AC100791.3-201ENST00000617619 330 ntBASIC13.57□□□□□ -0.24
LINC01546A6NGU7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 RASA4CP-201ENST00000424092 1398 ntBASIC13.57□□□□□ -0.24
LINC01546A6NGU7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 AC105020.6-201ENST00000621523 1217 ntBASIC13.56□□□□□ -0.24
LINC01546A6NGU7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01546A6NGU7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 MCRIP2P1-201ENST00000394346 511 ntBASIC13.55□□□□□ -0.24
LINC01546A6NGU7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 AC138028.4-201ENST00000564984 1845 ntBASIC13.55□□□□□ -0.24
LINC01546A6NGU7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01546A6NGU7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms