Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AL355355.2-201ENST00000442321 338 ntBASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AL032819.2-201ENST00000624543 2162 ntBASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AP002982.1-201ENST00000492365 877 ntBASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AF186192.3-201ENST00000583427 947 ntBASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BX088651.1-201ENST00000540551 451 ntBASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PHGDH-210ENST00000641115 1638 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms