Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AF121897.1-201ENST00000411867 3980 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 NLRP9P1-201ENST00000540920 2655 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 NTRK3-207ENST00000542733 2287 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 GPI-202ENST00000415930 4000 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AC009163.7-201ENST00000621929 2557 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ANKRD20A5P-201ENST00000431648 3556 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-319ENST00000641459 2542 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SMG1P2-201ENST00000566127 4221 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SKP72-201ENST00000362327 292 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RNA5SP71-201ENST00000362967 126 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-799P-201ENST00000363567 107 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RNA5SP78-201ENST00000364622 118 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORD24-201ENST00000383884 75 ntBASIC1.62□□□□□ -2.15
KRTAP4-4Q9BYR3 RNVU1-1-201ENST00000384610 164 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms