RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
PSEN1-205ENST00000406768 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
PSEN1-205ENST00000406768 MYT1Q01538 1121 aa15.3■□□□□ 0.04
PSEN1-205ENST00000406768 HRCP23327 699 aa14.83□□□□□ -0.04
PSEN1-205ENST00000406768 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
PSEN1-205ENST00000406768 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
PSEN1-205ENST00000406768 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
PSEN1-205ENST00000406768 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-205ENST00000406768 ZEB1P37275 1124 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-205ENST00000406768 TTBK1Q5TCY1 1321 aaPredicted RBP14.27□□□□□ -0.12
PSEN1-205ENST00000406768 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
PSEN1-205ENST00000406768 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
PSEN1-205ENST00000406768 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
PSEN1-205ENST00000406768 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-205ENST00000406768 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
PSEN1-205ENST00000406768 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
PSEN1-205ENST00000406768 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
PSEN1-205ENST00000406768 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
PSEN1-205ENST00000406768 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-205ENST00000406768 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
PSEN1-205ENST00000406768 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
PSEN1-205ENST00000406768 DIEXFQ68CQ4 756 aaKnown RBP13.68□□□□□ -0.22
PSEN1-205ENST00000406768 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
PSEN1-205ENST00000406768 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
PSEN1-205ENST00000406768 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
PSEN1-205ENST00000406768 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
PSEN1-205ENST00000406768 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
PSEN1-205ENST00000406768 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
PSEN1-205ENST00000406768 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
PSEN1-205ENST00000406768 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-205ENST00000406768 NEFLP07196 543 aa13.4□□□□□ -0.26
PSEN1-205ENST00000406768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
PSEN1-205ENST00000406768 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
PSEN1-205ENST00000406768 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-205ENST00000406768 CLSPNQ9HAW4 1339 aa13.26□□□□□ -0.29
PSEN1-205ENST00000406768 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-205ENST00000406768 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
PSEN1-205ENST00000406768 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
PSEN1-205ENST00000406768 BCANQ96GW7 911 aa13.19□□□□□ -0.3
PSEN1-205ENST00000406768 NACADO15069 1562 aa13.18□□□□□ -0.3
PSEN1-205ENST00000406768 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
PSEN1-205ENST00000406768 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-205ENST00000406768 ABCC9O60706 1549 aa13.06□□□□□ -0.32
PSEN1-205ENST00000406768 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
PSEN1-205ENST00000406768 MIER1Q8N108 512 aa13.03□□□□□ -0.32
PSEN1-205ENST00000406768 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
PSEN1-205ENST00000406768 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
PSEN1-205ENST00000406768 APLP2Q06481 763 aa12.99□□□□□ -0.33
PSEN1-205ENST00000406768 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
PSEN1-205ENST00000406768 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-205ENST00000406768 FKBP8Q14318 412 aa12.95□□□□□ -0.34
PSEN1-205ENST00000406768 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
PSEN1-205ENST00000406768 GLIPR1L2Q4G1C9 344 aa12.85□□□□□ -0.35
PSEN1-205ENST00000406768 DEKP35659 375 aaKnown RBP12.84□□□□□ -0.35
PSEN1-205ENST00000406768 NBR1Q14596 966 aa12.84□□□□□ -0.35
PSEN1-205ENST00000406768 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.36
PSEN1-205ENST00000406768 ITGAEP38570 1179 aa12.78□□□□□ -0.36
PSEN1-205ENST00000406768 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
PSEN1-205ENST00000406768 ANO8Q9HCE9 1232 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-205ENST00000406768 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
PSEN1-205ENST00000406768 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
PSEN1-205ENST00000406768 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
PSEN1-205ENST00000406768 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
PSEN1-205ENST00000406768 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.37
PSEN1-205ENST00000406768 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
PSEN1-205ENST00000406768 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
PSEN1-205ENST00000406768 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-205ENST00000406768 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
PSEN1-205ENST00000406768 ANP32CO43423 234 aa12.59□□□□□ -0.39
PSEN1-205ENST00000406768 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
PSEN1-205ENST00000406768 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-205ENST00000406768 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
PSEN1-205ENST00000406768 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-205ENST00000406768 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
PSEN1-205ENST00000406768 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-205ENST00000406768 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
PSEN1-205ENST00000406768 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
PSEN1-205ENST00000406768 PKNOX2Q96KN3 472 aa12.49□□□□□ -0.41
PSEN1-205ENST00000406768 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
PSEN1-205ENST00000406768 NEFMP07197 916 aa12.47□□□□□ -0.41
PSEN1-205ENST00000406768 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-205ENST00000406768 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
PSEN1-205ENST00000406768 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
PSEN1-205ENST00000406768 SLC24A1O60721 1099 aa12.41□□□□□ -0.42
PSEN1-205ENST00000406768 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
PSEN1-205ENST00000406768 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
PSEN1-205ENST00000406768 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-205ENST00000406768 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-205ENST00000406768 MSH5O43196 834 aa12.35□□□□□ -0.43
PSEN1-205ENST00000406768 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
PSEN1-205ENST00000406768 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
PSEN1-205ENST00000406768 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
PSEN1-205ENST00000406768 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.43
PSEN1-205ENST00000406768 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
PSEN1-205ENST00000406768 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
PSEN1-205ENST00000406768 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-205ENST00000406768 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
PSEN1-205ENST00000406768 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
PSEN1-205ENST00000406768 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
PSEN1-205ENST00000406768 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms