Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AP001005.1-201ENST00000571755 1248 ntBASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 AL390719.2-201ENST00000606993 987 ntBASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HCN4Q9Y3Q4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 FOSL1P1-201ENST00000511041 816 ntBASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 AP006587.1-201ENST00000534129 1502 ntBASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HCN4Q9Y3Q4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 SPDYE15P-201ENST00000424157 909 ntBASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 YBX1P10-201ENST00000444752 975 ntBASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 NEK4P2-201ENST00000580004 1012 ntBASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
HCN4Q9Y3Q4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 HLA-G-202ENST00000376815 851 ntBASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 AC008040.2-201ENST00000461049 708 ntBASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 SLC25A1P1-201ENST00000528351 927 ntBASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 GCSHP2-201ENST00000560971 527 ntBASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.67■□□□□ 0.74
HCN4Q9Y3Q4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCN4Q9Y3Q4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.66■□□□□ 0.74
HCN4Q9Y3Q4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCN4Q9Y3Q4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCN4Q9Y3Q4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms