Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SATB2Q9UPW6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SATB2Q9UPW6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SATB2Q9UPW6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SATB2Q9UPW6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SATB2Q9UPW6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SATB2Q9UPW6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 AC090340.1-201ENST00000620778 4980 ntBASIC18.77■□□□□ 0.6
SATB2Q9UPW6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 AK4P3-201ENST00000418260 669 ntBASIC18.77■□□□□ 0.6
SATB2Q9UPW6 AC004980.1-204ENST00000429707 299 ntBASIC18.77■□□□□ 0.6
SATB2Q9UPW6 AC131212.4-201ENST00000623606 975 ntBASIC18.77■□□□□ 0.6
SATB2Q9UPW6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SATB2Q9UPW6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SATB2Q9UPW6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SATB2Q9UPW6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SATB2Q9UPW6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SATB2Q9UPW6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.77■□□□□ 0.59
SATB2Q9UPW6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 INGX-201ENST00000359239 846 ntBASIC18.76■□□□□ 0.59
SATB2Q9UPW6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 YBX1P10-201ENST00000444752 975 ntBASIC18.76■□□□□ 0.59
SATB2Q9UPW6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SATB2Q9UPW6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 243.4 ms