Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HACD3Q9P035 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HACD3Q9P035 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HACD3Q9P035 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.43■□□□□ 0.7
HACD3Q9P035 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HACD3Q9P035 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.43■□□□□ 0.7
HACD3Q9P035 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.43■□□□□ 0.7
HACD3Q9P035 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.43■□□□□ 0.7
HACD3Q9P035 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HACD3Q9P035 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 HTR7P1-201ENST00000538670 1336 ntBASIC19.43■□□□□ 0.7
HACD3Q9P035 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HACD3Q9P035 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.43■□□□□ 0.7
HACD3Q9P035 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 AC104417.2-201ENST00000562989 1793 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 AC093484.2-201ENST00000580996 2166 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 Z82202.1-201ENST00000623446 1880 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.42■□□□□ 0.7
HACD3Q9P035 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 AP002982.1-201ENST00000492365 877 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.42■□□□□ 0.7
HACD3Q9P035 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 HLA-A-209ENST00000638375 975 ntBASIC19.42■□□□□ 0.7
HACD3Q9P035 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.42■□□□□ 0.7
HACD3Q9P035 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HACD3Q9P035 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HACD3Q9P035 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
HACD3Q9P035 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
HACD3Q9P035 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HACD3Q9P035 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
HACD3Q9P035 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HACD3Q9P035 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 NIFKP9-201ENST00000419265 221 ntBASIC19.41■□□□□ 0.7
HACD3Q9P035 AL158047.1-201ENST00000445918 881 ntBASIC19.41■□□□□ 0.7
HACD3Q9P035 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.41■□□□□ 0.7
HACD3Q9P035 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.41■□□□□ 0.7
HACD3Q9P035 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.41■□□□□ 0.7
HACD3Q9P035 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HACD3Q9P035 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HACD3Q9P035 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HACD3Q9P035 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HACD3Q9P035 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HACD3Q9P035 TNXA-203ENST00000507684 2038 ntBASIC19.41■□□□□ 0.7
HACD3Q9P035 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
HACD3Q9P035 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.4■□□□□ 0.7
HACD3Q9P035 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.4■□□□□ 0.7
HACD3Q9P035 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HACD3Q9P035 AC098818.2-201ENST00000564925 2320 ntBASIC19.4■□□□□ 0.7
HACD3Q9P035 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HACD3Q9P035 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HACD3Q9P035 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.4■□□□□ 0.7
HACD3Q9P035 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms