Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 HLA-L-209ENST00000420110 1011 ntBASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 AC142086.2-201ENST00000569753 217 ntBASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRDL1Q9BU40 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 AL355802.2-201ENST00000402069 882 ntBASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 PNMA6B-201ENST00000538162 1200 ntBASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRDL1Q9BU40 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AC093484.2-201ENST00000580996 2166 ntBASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 AC060766.5-201ENST00000590539 871 ntBASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRDL1Q9BU40 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms