Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PRPF18Q99633 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PRPF18Q99633 MIR663A-201ENST00000385250 93 ntBASIC18.64■□□□□ 0.57
PRPF18Q99633 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
PRPF18Q99633 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 IKBKGP1-201ENST00000612193 1073 ntBASIC18.64■□□□□ 0.57
PRPF18Q99633 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF18Q99633 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF18Q99633 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 AC073210.2-201ENST00000430369 194 ntBASIC18.63■□□□□ 0.57
PRPF18Q99633 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.63■□□□□ 0.57
PRPF18Q99633 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.63■□□□□ 0.57
PRPF18Q99633 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF18Q99633 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF18Q99633 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PRPF18Q99633 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRPF18Q99633 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF18Q99633 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF18Q99633 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF18Q99633 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF18Q99633 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 AC104581.1-202ENST00000635932 2618 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 AL133373.2-201ENST00000623187 2828 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 MIR935-201ENST00000401179 91 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.62■□□□□ 0.57
PRPF18Q99633 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PRPF18Q99633 AC005829.2-201ENST00000571422 1056 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 AL121832.2-201ENST00000610979 668 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 AL050303.2-201ENST00000619798 666 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 AL032819.2-201ENST00000624543 2162 ntBASIC18.62■□□□□ 0.57
PRPF18Q99633 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF18Q99633 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.62■□□□□ 0.57
PRPF18Q99633 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF18Q99633 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.61■□□□□ 0.57
PRPF18Q99633 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 AC020916.1-201ENST00000587762 1774 ntBASIC18.61■□□□□ 0.57
PRPF18Q99633 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF18Q99633 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PRPF18Q99633 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.61■□□□□ 0.57
PRPF18Q99633 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PRPF18Q99633 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF18Q99633 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF18Q99633 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF18Q99633 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF18Q99633 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF18Q99633 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms